The detailed information of tRNA gene sequence


Sequence ID>SRA1018690
Genome IDSRR035082.333106
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 158
End posion on genome 248
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacagagtga
tRNA gene sequence 
GGTGGAGTCGCATAGTCTGGTCCATTGCGATGGTTTGCTAAACCATTGAGTCGTAAGGCT
CACGTGGGTTCGAATCCCACCTCCACCGCCA
Downstream region at tRNA end position 
cgtagcaagt
Secondary structure (Cloverleaf model)
>SRA1018690	Ser	GCT
                   a      GCCA cgtagcaagt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G           | | |                 T T
  G         T T G C
    T C C A        G     TGAGTCGTAAGGCTCAC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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