The detailed information of tRNA gene sequence


Sequence ID>C151019255
Genome IDCP007232
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola [CP007232]
Start position on genome 48448
End posion on genome 48520
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
attaaaacca
tRNA gene sequence 
GGGGCTATAACTTAATTGGTAGAGTGTTTGTTTTGCAAGCAAAACGTTAGCGGTTCAAGT
CCGCTTGGCTCCAgtg
Downstream region at tRNA end position 
tgtgtgtgtt
Secondary structure (Cloverleaf model)
>C151019255	Ala	TGC
                   a      Agtg tgtgtgtgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     A - T          T G
                    T     T C G C C     A
      T A A        A      | | | | |     A
    T       T T C A       A G C G G     C
    G       + | | |                 T T
    G       G A G T
      T A          G     ACGTT
                    T - A
                    T - A
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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