The detailed information of tRNA gene sequence


Sequence ID>C151019259
Genome IDCP007232
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola [CP007232]
Start position on genome 132241
End posion on genome 132315
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtcgcttgct
tRNA gene sequence 
tGAGGGTATAGCTTAGGCGGTAAAGCAACGGTCTTCAAAACCGTAGATATAGGTTCAATT
CCTATTGTCCTCGCCTc
Downstream region at tRNA end position 
ccttgctttc
Secondary structure (Cloverleaf model)
>C151019259	SeC	TCA
                   t      CCTc ccttgctttc
                     t + G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     T + G
                     A - T          T T
                    T     T A T C C     A
      G G A        A      | | | | |     A
    C       T T C G       A T A G G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     AGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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