The detailed information of tRNA gene sequence


Sequence ID>SRA1018980
Genome IDSRR035082.381710
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 267
End posion on genome 189
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaataacat
tRNA gene sequence 
AAGGCGTTGGCCCAGCGGCGACGGCAACGGTCTCCAAAACCGTATATCACCGAGAGTTCG
AGTCTCTCACGCCTTGCCA
Downstream region at tRNA end position 
tttttaataa
Secondary structure (Cloverleaf model)
>SRA1018980	Trp	CCA
                   t      GCCA tttttaataa
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       C C C G       G A G A G     C
    G         | | |                 T T
    C       C G G C
      G A          A     ATATCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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