The detailed information of tRNA gene sequence


Sequence ID>SRA1019001
Genome IDSRR035082.384427
Search identical group
Phylum/Class454 Sequencing (SRP001803)
Species
Start position on genome 245
End posion on genome 150
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataaattta
tRNA gene sequence 
GGAGAGGTGCCTGAGTCTGGTTGAAAGGGGGAGTTTGCTAAACTTCTATAGGGTGTAATA
GCTCTATCATGGGTTCAAATCCCATCCTCTCCGCTA
Downstream region at tRNA end position 
attaaagccc
Secondary structure (Cloverleaf model)
>SRA1019001	Ser	GCT
                   a      GCTA attaaagccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C T G A        G      | | | | |     A
  T         G T C C       A T G G G     C
  G           | | |                 T T
  G         A A G G
    T T G A        G     TATAGGGTGTAATAGCTCTATC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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