The detailed information of tRNA gene sequence


Sequence ID>SRA1020162
Genome IDSRR035083.64961
Search identical group
Phylum/Class454 Sequencing (SRP001804)
Species
Start position on genome 8
End posion on genome 97
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnntgaagat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGTACTTGCTTGGAAAGCAAGCGTGGGAGAAATCCCA
CCGCAGGTTCGAATCCTGTTCTCTCCGCAA
Downstream region at tRNA end position 
taaaaagtgt
Secondary structure (Cloverleaf model)
>SRA1020162	Ser	GGA
                   t      GCAA taaaaagtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | +                 T T
    T       A G G T
      T T A        A     CGTGGGAGAAATCCCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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