The detailed information of tRNA gene sequence


Sequence ID>SRA1020240
Genome IDSRR035083.80110
Search identical group
Phylum/Class454 Sequencing (SRP001804)
Species
Start position on genome 250
End posion on genome 322
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgttttacT
tRNA gene sequence 
GGGTGCGTAGTATACTGGTAGAATGAGCGGCTCCAACCCGCTAGAAGGGGGTTCGATTCC
CTCCGCGCCCATgc
Downstream region at tRNA end position 
gcgctttgcg
Secondary structure (Cloverleaf model)
>SRA1020240	Trp	CCA
                   T      ATgc gcgctttgcg
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        C A        A      | + | | |     G
      T     T A T G       G G G G G     C
      G     +   | +                 T T
      G     G A A T
        T A        G     AGAA
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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