The detailed information of tRNA gene sequence


Sequence ID>SRA1020499
Genome IDSRR035083.124254
Search identical group
Phylum/Class454 Sequencing (SRP001804)
Species
Start position on genome 187
End posion on genome 274
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attatgacgt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCTTAGTGCGCTCGCTTGGAAAGCGGGTAACCTTTACGGGTTC
ACGGGTTCGAATCCCGTCCTCTCCGCCA
Downstream region at tRNA end position 
ttcgcaacaa
Secondary structure (Cloverleaf model)
>SRA1020499	Ser	GGA
                   t      GCCA ttcgcaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A C G G G     C
    G       + | | |                 T T
    C       G T G C
      T T A        G     TAACCTTTACGGGTTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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