The detailed information of tRNA gene sequence


Sequence ID>C151035644
Genome IDCP008699
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola [CP008699]
Start position on genome 46580
End posion on genome 46652
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcgcttgct
tRNA gene sequence 
tGAGGGCATAGCTTAGGCGGTAAAGCAACGGTCTTCAAAACCGTAGATATGGGTTCGATT
CCTGTTGTCCTCGCttt
Downstream region at tRNA end position 
ctttgcctgc
Secondary structure (Cloverleaf model)
>C151035644	SeC	TCA
                   t      Cttt ctttgcctgc
                     t + G
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T T
                    T     T G T C C     A
      G G A        A      | + + | |     G
    C       T T C G       A T G G G     C
    G       | | | |                 T T
    G       A A G C
      T A          A     AGAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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