The detailed information of tRNA gene sequence


Sequence ID>SRA1020812
Genome IDSRR035083.167648
Search identical group
Phylum/Class454 Sequencing (SRP001804)
Species
Start position on genome 232
End posion on genome 323
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttaaattt
tRNA gene sequence 
GGAGGGTTACTCAAGTGGCTAAAGAGGAAAGTTTGCTAAACTTTTAGGTCAGTAAAATGG
CGCAGAGGGTTCAAATCCCCTACCCTCTTCAA
Downstream region at tRNA end position 
ataaattgga
Secondary structure (Cloverleaf model)
>SRA1020812	Ser	GCT
                   t      TCAA ataaattgga
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
      T G A        A      +   | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T A A        G     TAGGTCAGTAAAATGGCGCA
                    A - T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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