The detailed information of tRNA gene sequence


Sequence ID>C151040667
Genome IDCP008941
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Paracaedibacter acanthamoebae [CP008941]
Start position on genome 563524
End posion on genome 563600
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcaaatcagt
tRNA gene sequence 
CGGGAAGTAGCGCAGCCTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGGAGGTTCAAA
TCCTCTCTTCCCGACCA
Downstream region at tRNA end position 
tttgtattta
Secondary structure (Cloverleaf model)
>C151040667	Pro	TGG
                   t      ACCA tttgtattta
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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