The detailed information of tRNA gene sequence


Sequence ID>C151066494
Genome IDCP010311
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeoalkalibacter subterraneus Red1 [CP010311]
Start position on genome 2745074
End posion on genome 2745169
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttttcacttc
tRNA gene sequence 
GGGAGTAGTTCGTAGTCTGGTGACGCGCCCGGTCTTCAAAACCGGTGGGGGGCGTATCCC
GTCCCCGGTGGGTTCGATTCCCATCTGCTCCCGCCA
Downstream region at tRNA end position 
taatttccac
Secondary structure (Cloverleaf model)
>C151066494	SeC	TCA
                   c      GCCA taatttccac
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G - C          T T
                    T     T A C C C     A
      C T G        T      + | | | |     G
    T       A T G C       G T G G G     C
    G         + | |                 T T
    G       C G C G
      T G A        C     TGGGGGGCGTATCCCGTCCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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