The detailed information of tRNA gene sequence


Sequence ID>SRA1023811
Genome IDSRR035084.181923
Search identical group
Phylum/Class454 Sequencing (SRP001805)
Species
Start position on genome 247
End posion on genome 339
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaaacaatt
tRNA gene sequence 
TGCGGAGTAGAGTAGCCCGGCCTAACTCGGGAGTCTCATAAGCTTCCAGACCCGATAAGG
GTCTCGTGGGTTCGAATCCCACCTCCGCTACCA
Downstream region at tRNA end position 
ttttaaaaga
Secondary structure (Cloverleaf model)
>SRA1023811	Met	CAT
                   t      ACCA ttttaaaaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  C         T G A G       G T G G G     C
  G         | | | |                 T T
  G         A C T C
    C C T A        G     CAGACCCGATAAGGGTCTC
                    G - C
                    G + T
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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