The detailed information of tRNA gene sequence


Sequence ID>SRA1024297
Genome IDSRR035084.292980
Search identical group
Phylum/Class454 Sequencing (SRP001805)
Species
Start position on genome 135
End posion on genome 46
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttattttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGTGTGTGTACTGTTAAAGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttattgtaag
Secondary structure (Cloverleaf model)
>SRA1024297	Ser	GGA
                   t      GCCA ttattgtaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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