The detailed information of tRNA gene sequence


Sequence ID>SRA1024340
Genome IDSRR035084.303215
Search identical group
Phylum/Class454 Sequencing (SRP001805)
Species
Start position on genome 382
End posion on genome 306
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcactgcca
tRNA gene sequence 
CGGGCGGTAGCTCAGCTGGTTAGAGCCCCGAACTCATAATTCGGTAGTCCTGGGTTCAAG
TCCCAGTCGCCCTACTA
Downstream region at tRNA end position 
gccgtcgatg
Secondary structure (Cloverleaf model)
>SRA1024340	Met	CAT
                   a      ACTA gccgtcgatg
                     C   T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T          T G
                    T     G A C C C     A
      C G A        A      | | | | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TAGTC
                    C - G
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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