The detailed information of tRNA gene sequence


Sequence ID>C151078452
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 54372
End posion on genome 54447
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
acttgcgtgt
tRNA gene sequence 
GGGGTCGTAGCGCAGCTGGGAGCGCGTCGCCTTCGCAAGGCGAAAGTCGTGGGTTCGAAT
CCCATCGACTCCACCA
Downstream region at tRNA end position 
gaaaaaaagg
Secondary structure (Cloverleaf model)
>C151078452	Ala	CGC
                   t      ACCA gaaaaaaagg
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T A C C C     A
      C G A        A      + | | | |     G
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AAGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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