The detailed information of tRNA gene sequence


Sequence ID>C151078454
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 112443
End posion on genome 112517
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aattacgcgt
tRNA gene sequence 
GGCCCCATAGGATAACGGCTAGTCCATCGGATTCTCAGTCCGAAGGTCGGGGTTCGATTC
CCCGTGGGGCTGCCA
Downstream region at tRNA end position 
gtcaataacc
Secondary structure (Cloverleaf model)
>C151078454	Glu	CTC
                   t      GCCA gtcaataacc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        A      | | | | |     G
    G       T A G G       C G G G G     C
    G       + | | |                 T T
    C       G T C C
      T A          A     AGGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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