The detailed information of tRNA gene sequence


Sequence ID>C151078456
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 334774
End posion on genome 334849
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttctttttgc
tRNA gene sequence 
CAGGGGTTAGTTCAGTCGGTAGAACGCTGGTTTCGGGAACCAGAGGCCCGGGGTTCAAGT
CCCCGACCCCTGACCA
Downstream region at tRNA end position 
tttgtgtgac
Secondary structure (Cloverleaf model)
>C151078456	Pro	CGG
                   c      ACCA tttgtgtgac
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     G C C C C     A
      T G A        A      | | | | |     A
    C       C T T G       C G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     AGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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