The detailed information of tRNA gene sequence


Sequence ID>C151078460
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 639441
End posion on genome 639517
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttctggtat
tRNA gene sequence 
GCAGGCGTAGCTTCAATCGGTGGAGCGCCGCCTTGGTAAGGCGGAGGTTGTGAGTTCGAG
TCTCATCGCCTGCTCCA
Downstream region at tRNA end position 
aaaggcctcg
Secondary structure (Cloverleaf model)
>C151078460	Thr	GGT
                   t      TCCA aaaggcctcg
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T A C T C     A
      A A C        A      + | | | |     G
    T       T T C G       G T G A G     C
    C       + | | |                 T T
    G       G A G C
      G T G        G     AGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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