The detailed information of tRNA gene sequence


Sequence ID>C151078478
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 1423366
End posion on genome 1423290
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agatattcgg
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
ttatggcggt
Secondary structure (Cloverleaf model)
>C151078478	Met	CAT
                   g      ACCA ttatggcggt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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