The detailed information of tRNA gene sequence


Sequence ID>C151078479
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 1423285
End posion on genome 1423209
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaccattat
tRNA gene sequence 
GGCGGTGTAGCTCAGCTGGCTAGAGCATGCGGTTCATACCCGCAGAGTCGACAGTTCGAG
TCTGTCCGCCGCCACCA
Downstream region at tRNA end position 
aagcccctat
Secondary structure (Cloverleaf model)
>C151078479	Met	CAT
                   t      ACCA aagcccctat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GAGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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