The detailed information of tRNA gene sequence


Sequence ID>C151078482
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 1038263
End posion on genome 1038187
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttaacgtc
tRNA gene sequence 
GGGGACGTGGTGAAGATGGTTATCATGCCGGTCTGTCACACCGGTGGCCGCGAGTTCGAG
TCTCGTCGTCCCCGCCA
Downstream region at tRNA end position 
gtgaaaaagg
Secondary structure (Cloverleaf model)
>C151078482	Asp	GTC
                   c      GCCA gtgaaaaagg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G C T C     A
      A G A        G      + | | | |     G
    T       A G T G       G C G A G     C
    G       | | | +                 T T
    G       T C A T
      T T A        G     TGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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