The detailed information of tRNA gene sequence


Sequence ID>C151078490
Genome IDCP011232
Search identical group
Phylum/ClassThermotogota
SpeciesKosmotoga pacifica SLHLJ1 [CP011232]
Start position on genome 509964
End posion on genome 509875
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttatttgcgg
tRNA gene sequence 
GCCGAGGTGGTGGAATTGGCAGACGCGGCGGACTCAAAATCCGCTGGGGTTGAGAGCCCC
GTGCGGGTTCGACTCCCGCCCTCGGCACCA
Downstream region at tRNA end position 
gaggaaggct
Secondary structure (Cloverleaf model)
>C151078490	Leu	CAA
                   g      ACCA gaggaaggct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGGGGTTGAGAGCCCCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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