The detailed information of tRNA gene sequence


Sequence ID>SRA1025060
Genome IDSRR035084.473857
Search identical group
Phylum/Class454 Sequencing (SRP001805)
Species
Start position on genome 155
End posion on genome 72
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaaaaatat
tRNA gene sequence 
GTTCGTGTGTCCGAGTGGCTAAGGAGGCGGCCTGCAAAGCCGTTAACCCCGAAAGGGTCG
TGGGTTCGAATCCCACCACGAACTttg
Downstream region at tRNA end position 
gatgcaatcc
Secondary structure (Cloverleaf model)
>SRA1025060	Cys	GCA
                   t      Tttg gatgcaatcc
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T A          G     TAACCCCGAAAGGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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