The detailed information of tRNA gene sequence


Sequence ID>SRA1025139
Genome IDSRR035084.496031
Search identical group
Phylum/Class454 Sequencing (SRP001805)
Species
Start position on genome 141
End posion on genome 234
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acctgaatct
tRNA gene sequence 
GGAGGGGATGGCCGAGCGGCCGAAGGCGACGGTCTTGAAAACCGTTGAGGCGGTACCCCC
CGTCTCCGTGGGTTCAAATCCCACTCCCTCGCAAc
Downstream region at tRNA end position 
gggcgcgcta
Secondary structure (Cloverleaf model)
>SRA1025139	Ser	TGA
                   t      CAAc gggcgcgcta
                     G   G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    A     C A C C C     A
    C G A G        T      | | | | |     A
  G         C C G G       G T G G G     C
  G           |   |                 T T
  C         A G G C
    C G A          G     TGAGGCGGTACCCCCCGTCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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