The detailed information of tRNA gene sequence


Sequence ID>C151083592
Genome IDCP011509
Search identical group
Phylum/ClassMyxococcota
SpeciesArchangium gephyra DSM 2261 [CP011509]
Start position on genome 5552152
End posion on genome 5552057
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcgcgagt
tRNA gene sequence 
GGTAGGACCTCCGGACCTGGTGGCCGGCCCGGTCTTCAAAACCGGTGGGGGGCATGGAGA
CATGTCCCTGGGAGGTTCGATTCCTCTGTCCTACCGatc
Downstream region at tRNA end position 
cgttttcgcg
Secondary structure (Cloverleaf model)
>C151083592	SeC	TCA
                   t      Gatc cgttttcgcg
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T T
                    C     T C T C C     A
      C C A        T      + | | | |     G
    T       G G C C       G G A G G     C
    G       | | | |                 T T
    G       C C G G
      T G G        C     TGGGGGGCATGGAGACATGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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