The detailed information of tRNA gene sequence


Sequence ID>SRA1025625
Genome IDSRR035085.52262
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 260
End posion on genome 164
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aggtgtttgt
tRNA gene sequence 
GGAGAGATGGCTGAGTCTGGTTGAAGGCGCTCGACTCGAAATCGAGTGTACTGCCTTAAC
AGCAGTACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtgcaaccaa
Secondary structure (Cloverleaf model)
>SRA1025625	Ser	CGA
                   t      GCCA gtgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T G A        G     TGTACTGCCTTAACAGCAGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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