The detailed information of tRNA gene sequence


Sequence ID>C151086189
Genome IDCP011770
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCroceicoccus naphthovorans PQ-2 [CP011770]
Start position on genome 1087147
End posion on genome 1087222
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caggccccgc
tRNA gene sequence 
AGGGGTGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGCCACGGGTTCGAAT
CCTGTCACCCCTGCCA
Downstream region at tRNA end position 
ttttttccga
Secondary structure (Cloverleaf model)
>C151086189	Trp	CCA
                   c      GCCA ttttttccga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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