The detailed information of tRNA gene sequence


Sequence ID>SRA1025938
Genome IDSRR035085.113470
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 201
End posion on genome 127
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgtctttgag
tRNA gene sequence 
GGGCCGTTAACTCAGCGGGAGAGTGCTATCCTCACACGGTAGAAGCCACTGGTTCAAATC
CAGTACGGCCCACCA
Downstream region at tRNA end position 
ttcttgcttc
Secondary structure (Cloverleaf model)
>SRA1025938	Val	CAC
                   g      ACCA ttcttgcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     A
      C     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGCC
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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