The detailed information of tRNA gene sequence


Sequence ID>C151087618
Genome IDCP011931
Search identical group
Phylum/ClassSpirochaetota
SpeciesLeptospira interrogans serovar Manilae UP-MMC-NIID LP [CP011931, CP011932]
Start position on genome 2340328
End posion on genome 2340401
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaatcactcc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCGGCAGACTCATAATCTGCGGGTCGAAGGTTCAAG
TCCTTCTGGGCCCAacg
Downstream region at tRNA end position 
gagtaacccc
Secondary structure (Cloverleaf model)
>C151087618	Met	CAT
                   c      Aacg gagtaacccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C T T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GGGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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