The detailed information of tRNA gene sequence


Sequence ID>SRA1026105
Genome IDSRR035085.143912
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 231
End posion on genome 141
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttagaaatt
tRNA gene sequence 
GGAGAGGTGCTCGAGTGGCTGAAGAGGCTCGCCTGGAAAGCGGGTATACCCCAAAAGGGT
ATCGCGGGTTCGAATCCCGCCTTCTCCGCAA
Downstream region at tRNA end position 
ttagaaaaaa
Secondary structure (Cloverleaf model)
>SRA1026105	Ser	GGA
                   t      GCAA ttagaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TATACCCCAAAAGGGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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