The detailed information of tRNA gene sequence


Sequence ID>SRA1026133
Genome IDSRR035085.149412
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 440
End posion on genome 347
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgatcttgg
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGGAGGATTGCTAATCCTTTGTACGCTTGTAAAGG
TGTACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttgagttt
Secondary structure (Cloverleaf model)
>SRA1026133	Ser	GCT
                   g      GCCA ttttgagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACGCTTGTAAAGGTGTACC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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