The detailed information of tRNA gene sequence


Sequence ID>SRA1026152
Genome IDSRR035085.153918
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 44
End posion on genome 119
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttgatac
tRNA gene sequence 
AGGTCAGTAGTTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGTGTTGGGGGTTCGACT
CCCTCCTGACCTGCCA
Downstream region at tRNA end position 
tttgttattg
Secondary structure (Cloverleaf model)
>SRA1026152	Trp	CCA
                   c      GCCA tttgttattg
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T C
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      C A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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