The detailed information of tRNA gene sequence


Sequence ID>SRA1026380
Genome IDSRR035085.197658
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 410
End posion on genome 323
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcactgcgc
tRNA gene sequence 
GGAGACGTGGCGAAACAGGTAGCCGCACCCGTCTGCTAAGCGGGCGTACCTTCGGGTACT
GAGGGTTCGAGCCCCTCCGTCTCCGCCT
Downstream region at tRNA end position 
ggacgcggcc
Secondary structure (Cloverleaf model)
>SRA1026380	Ser	GCT
                   c      GCCT ggacgcggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     C T C C C     A
      C A A        G      | | | | |     G
    A       A G C G       G A G G G     C
    G         | | |                 T T
    G       C C G C
      T A G        A     CGTACCTTCGGGTACT
                    C - G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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