The detailed information of tRNA gene sequence


Sequence ID>C151092035
Genome IDCP012160
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOctadecabacter temperatus SB1 [CP012160]
Start position on genome 1532334
End posion on genome 1532421
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caatcgacac
tRNA gene sequence 
GGAGAGGTGGCGGAGTGGTCGAACGTGGCGGTCTCGAAAACCGTTGAGCCTAACGGTTCC
CAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
tcttgattag
Secondary structure (Cloverleaf model)
>C151092035	Ser	CGA
                   c      GCCA tcttgattag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C G       C A G G G     C
    G         | | +                 T T
    T       A C G T
      C G A        G     TGAGCCTAACGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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