The detailed information of tRNA gene sequence


Sequence ID>SRA1026432
Genome IDSRR035085.206208
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 118
End posion on genome 44
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnncttcT
tRNA gene sequence 
GGGGCTGTAGCTCAAACTGGTGAGCACCCCTTTTGCATGGGGAGGTACGCGGGTTCGAAT
CCCGTCAGCTCCAAtc
Downstream region at tRNA end position 
aaaaaacgcc
Secondary structure (Cloverleaf model)
>SRA1026432	Ala	TGC
                   T      AAtc aaaaaacgcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      A A A        A      + | | | |     G
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T          A     GGTAC
                    C   A
                    C - G
                    C - G
                    C - G
                    T + G
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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