The detailed information of tRNA gene sequence


Sequence ID>SRA1026679
Genome IDSRR035085.257548
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 278
End posion on genome 365
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcgccc
tRNA gene sequence 
GGAGGAATGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGTACCGCAAGGTACC
GGGGGTTCGAATCCCTCTTCCTCCGCAA
Downstream region at tRNA end position 
tccaaaatcc
Secondary structure (Cloverleaf model)
>SRA1026679	Ser	TGA
                   c      GCAA tccaaaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTACCGCAAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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