The detailed information of tRNA gene sequence


Sequence ID>SRA1026691
Genome IDSRR035085.261808
Search identical group
Phylum/Class454 Sequencing (SRP001806)
Species
Start position on genome 193
End posion on genome 284
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaataaaat
tRNA gene sequence 
GGAGGCGTACTCAAGTTGGCCAAAGAGGACAGTTTGCTAAATTGTTAGACCGAGAAATTG
GTGCGTAGGTTCGAATCCTATCGCCTCCGCCA
Downstream region at tRNA end position 
tttttttaaa
Secondary structure (Cloverleaf model)
>SRA1026691	Ser	GCT
                   t      GCCA tttttttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
    T T G A        A      + | | | |     G
  G         A C T C       G T A G G     C
  G           | | |                 T T
  C         A G A G
    C A A          G     TAGACCGAGAAATTGGTGC
                    A - T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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