The detailed information of tRNA gene sequence


Sequence ID>C151100251
Genome IDHG322950
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas knackmussii B13 [HG322950]
Start position on genome 3540729
End posion on genome 3540642
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggcccttcc
tRNA gene sequence 
GGAAGTGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGACGGGCAACCGTCC
TAGAGTTCGAATCTCTACGCTTCCGCCA
Downstream region at tRNA end position 
tctgcttcaa
Secondary structure (Cloverleaf model)
>C151100251	Ser	TGA
                   c      GCCA tctgcttcaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     A T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       T A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACGGGCAACCGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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