The detailed information of tRNA gene sequence


Sequence ID>SRA1027260
Genome IDSRR035086.91587
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 301
End posion on genome 213
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcaaggcga
tRNA gene sequence 
GGAGAGATGGCAGAGAGGCCGAATGCGCCGGTTTGCTAAACCGGTGAGCCGTGTAAACGG
TTCCACGGGTTCGAATCCCGTTCTCTCCGtat
Downstream region at tRNA end position 
tcaaattaat
Secondary structure (Cloverleaf model)
>SRA1027260	Ser	GCT
                   a      Gtat tcaaattaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T G C C C     A
      A G A        G      | | | | |     G
    G       G A C G       A C G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        G     TGAGCCGTGTAAACGGTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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