The detailed information of tRNA gene sequence


Sequence ID>SRA1027266
Genome IDSRR035086.92862
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 343
End posion on genome 414
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctaaattta
tRNA gene sequence 
AAGGGAATAGTTTAATTGGTAAAACAGTAGTCTCCAAAACTATCATTCGAAGTTCAAGTC
TTCGTTCCCTTGttt
Downstream region at tRNA end position 
tattagaaaa
Secondary structure (Cloverleaf model)
>SRA1027266	Trp	CCA
                   a      Gttt tattagaaaa
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     G C T T C     A
      T A A        A      | | | | |     A
    T       T T T G       C G A A G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     CATT
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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