The detailed information of tRNA gene sequence


Sequence ID>SRA1027285
Genome IDSRR035086.96252
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 135
End posion on genome 223
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aactctaaaT
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGACGATGGCGCAGCACTGGAAATGCTGTATAGGGGCAACTCTA
TCGAGGGTTCGAATCCCTCCCTCTCCGTag
Downstream region at tRNA end position 
ttcatcaaaa
Secondary structure (Cloverleaf model)
>SRA1027285	Ser	GGA
                   T      GTag ttcatcaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        G     TATAGGGGCAACTCTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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