The detailed information of tRNA gene sequence


Sequence ID>SRA1027302
Genome IDSRR035086.101809
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 428
End posion on genome 339
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcaagggaA
tRNA gene sequence 
GGAGAGGTGGCAGAGCTGGTCGAATGCGTCTGATTTGAAATCAGAAGAAGCTTTACCGTT
TCCGTGGGTTCGAATCCCACTCTCTCCTAtt
Downstream region at tRNA end position 
tttttttact
Secondary structure (Cloverleaf model)
>SRA1027302	Ser	TGA
                   A      TAtt tttttttact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G           | | |                 T T
  T         A T G C
    C G A          G     AGAAGCTTTACCGTTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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