The detailed information of tRNA gene sequence


Sequence ID>SRA1027409
Genome IDSRR035086.120223
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 125
End posion on genome 39
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagttaatcc
tRNA gene sequence 
GCATTTATGGCCGAGTGGACGATGGCTCGGGACTCATAATCCCGCTTCGAAAGAACAGCG
CTGGTTCGAATCCAGCTGGATGCATCA
Downstream region at tRNA end position 
taaagaacga
Secondary structure (Cloverleaf model)
>SRA1027409	Met	CAT
                   c      ATCA taaagaacga
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     T + G
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        T     CTTCGAAAGAACAGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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