The detailed information of tRNA gene sequence


Sequence ID>C151104072
Genome IDLN794158
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Methylopumilus turicensis MMS-10A-171 [LN794158]
Start position on genome 780420
End posion on genome 780509
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgccacctc
tRNA gene sequence 
GGAGAGATGGATGAGTGGTTTAAGTCACCACCCTGGAAAGGTGGCACAGGGTTATCCCTG
TCGCGAGTTCGAATCTCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ggttttttta
Secondary structure (Cloverleaf model)
>C151104072	Ser	GGA
                   c      GCCA ggttttttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G A G     C
    G         + | |                 T T
    T       A G T C
      T T A        A     CACAGGGTTATCCCTGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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