The detailed information of tRNA gene sequence


Sequence ID>C151104214
Genome IDLN824141
Search identical group
Phylum/ClassThermotogota
SpeciesDefluviitoga tunisiensis [LN824141]
Start position on genome 1929286
End posion on genome 1929197
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atccaactac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCTTGCCTGCTAAGCAAGTGTAGAGGTAACTCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttgtttattg
Secondary structure (Cloverleaf model)
>C151104214	Ser	GCT
                   c      GCCA ttgtttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTAGAGGTAACTCTACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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