The detailed information of tRNA gene sequence


Sequence ID>C151104245
Genome IDLN827929
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Methylopumilus planktonicus MMS-10A-171 [LN827929]
Start position on genome 691196
End posion on genome 691286
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcacgctcc
tRNA gene sequence 
GGAAGAGTGGCTGAGCGGTTTAAGGCAGCGGTCTTGAAAACCGTCGAGGGTTCATAGCCC
TCCGTGAGTTCGAATCTCACCTCTTCCGCCA
Downstream region at tRNA end position 
tacatcttta
Secondary structure (Cloverleaf model)
>C151104245	Ser	TGA
                   c      GCCA tacatcttta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     CGAGGGTTCATAGCCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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