The detailed information of tRNA gene sequence


Sequence ID>C151104256
Genome IDLN827929
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Methylopumilus planktonicus MMS-10A-171 [LN827929]
Start position on genome 939592
End posion on genome 939516
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgttttatag
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
CCCAACCAGACCCACCA
Downstream region at tRNA end position 
gatttaatct
Secondary structure (Cloverleaf model)
>C151104256	Ile	GAT
                   g      ACCA gatttaatct
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          C G
                    T     C A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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