The detailed information of tRNA gene sequence


Sequence ID>SRA1027684
Genome IDSRR035086.172806
Search identical group
Phylum/Class454 Sequencing (SRP001807)
Species
Start position on genome 377
End posion on genome 464
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgccgtca
tRNA gene sequence 
TGGTGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTGTACGGCAACGTAC
CGAGGGTTCGAATCCCTCCTCACCGCCAt
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1027684	Ser	GGA
                   a      CCAt tnnnnnnnnn
                     T + G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    G     C T C C C     A
    T G A G        T      | | | | |     G
  G         C C G G       G A G G G     C
  G           |   |                 T T
  T         A G G C
    C G A          G     TGTACGGCAACGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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