The detailed information of tRNA gene sequence


Sequence ID>C153000135
Genome IDCP004403
Search identical group
Phylum/ClassAlphaproteobacteria
Speciesendosymbiont of Acanthamoeba sp. UWC8 [CP004403]
Start position on genome 1197856
End posion on genome 1197780
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
atcttttatg
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGTTAGAGCGCAAGGTTGTGGTTCTTGAGGCCGCGGATTCGAT
CTCCGTCGCTCGCCCCA
Downstream region at tRNA end position 
ttttttcttt
Secondary structure (Cloverleaf model)
>C153000135	His	GTG
                   g      CCCA ttttttcttt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C T
                    T     T G C C T     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G A     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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